Phosphatase enzymes are essential to many biological functions, because phosphorylation (e.g. by protein kinases) and dephosphorylation (by phosphatases) serve diverse roles in cellular regulation and signaling.
Whereas phosphatases remove phosphate groups from molecules, kinases catalyze the transfer of phosphate groups to molecules from ATP.
Together, kinases and phosphatases direct a form of post-translational modification that is essential to the cell's regulatory network.
Phosphatase enzymes are not to be confused with phosphorylase enzymes, which catalyze the transfer of a phosphate group from hydrogen phosphate to an acceptor.
Due to their prevalence in cellular regulation, phosphatases are an area of interest for pharmaceutical research.
Water is split in the reaction, with the -OH group attaching to the phosphate ion, and the H+ protonating the hydroxyl group of the other product.
The net result of the reaction is the destruction of a phosphomonoester and the creation of both a phosphate ion and a molecule with a free hydroxyl group.
Phosphatases are able to dephosphorylate seemingly different sites on their substrates with great specificity.
Identifying the "phosphatase code," that is, the mechanisms and rules that govern substrate recognition for phosphatases, is still a work in progress, but the first comparative analysis of all the protein phosphatases encoded across nine eukaryotic 'phosphatome' genomes is now available.
Studies reveal that so called "docking interactions" play a significant role in substrate binding.
A phosphatase recognizes and interacts with various motifs (elements of secondary structure) on its substrate; these motifs bind with low affinity to docking sites on the phosphatase, which are not contained within its active site.
Although each individual docking interaction is weak, many interactions occur simultaneously, conferring a cumulative effect on binding specificity.
Docking interactions can also allosterically regulate phosphatases and thus influence their catalytic activity.
In contrast to kinases, phosphatase enzymes recognize and catalyze a wider array of substrates and reactions.
For example, in humans, Ser/Thr kinases outnumber Ser/Thr phosphatases by a factor of ten.
To some extent, this disparity results from incomplete knowledge of the human phosphatome, that is, the complete set of phosphatases expressed in a cell, tissue, or organism.
Many phosphatases have yet to be discovered, and for numerous known phosphatases, a substrate has yet to be identified.
However, among well-studied phosphatase/kinase pairs, phosphatases exhibit greater variety than their kinase counterparts in both form and function; this may result from the lesser degree of conservation among phosphatases.
Main article: Protein phosphatase
A protein phosphatase is an enzyme that dephosphorylates an amino acid residue of its protein substrate.
Whereas protein kinases act as signaling molecules by phosphorylating proteins, phosphatases remove the phosphate group, which is essential if the system of intracellular signaling is to be able to reset for future use.
The tandem work of kinases and phosphatases constitute a significant element of the cell's regulatory network.
Phosphorylation (and dephosphorylation) is among the most common modes of posttranslational modification in proteins, and it is estimated that, at any given time, up to 30% of all proteins are phosphorylated.
Two notable protein phosphatases are PP2A and PP2B.
PP2A is involved in multiple regulatory processes, such as DNA replication, metabolism, transcription, and development.
Main article: Nucleotidase
Nucleotidases are essential for cellular homeostasis, because they are partially responsible for maintaining a balanced ratio of nucleotides to nucleosides.
Some nucleotidases function outside the cell, creating nucleosides that can be transported into the cell and used to regenerate nucleotides via salvage pathways.
Inside the cell, nucleotidases may help to maintain energy levels under stress conditions.
Two phosphatases, glucose-6-phosphatase and fructose-1,6-bisphosphatase, catalyze irreversible steps in gluconeogenesis.
Each cleaves a phosphate group from a six-carbon sugar phosphate intermediate.
Within the larger class of phosphatase, the Enzyme Commission recognizes 104 distinct enzyme families.
Phosphatases are classified by substrate specificity and sequence homology in catalytic domains.
Despite their classification into over one hundred families, all phosphatases still catalyze the same general hydrolysis reaction.
In in-vitro experiments, phosphatase enzymes seem to recognize many different substrates, and one substrate may be recognized by many different phosphatases.
However, when experiments have been carried out in-vivo, phosphatase enzymes have been shown to be incredibly specific.
In some cases, a protein phosphatase (i.e. one defined by its recognition of protein substrates) can catalyze the dephosphorylation of nonprotein substrates.
Thus, one phosphatase can exhibit the qualities of multiple phosphatase families.
- Acid phosphatase
- Alkaline phosphatase
- Endonuclease/Exonuclease/phosphatase family
- Protein phosphatase
- Protein phosphatase 2 (PP2A)
Credits to the contents of this page go to the authors of the corresponding Wikipedia page: en.wikipedia.org/wiki/Phosphatase.